Protein Information

Protein ZmARF5
ZmARF5 is a protein in the ARF family.
Information
TF Name:	ZmARF5
Species:	Maize
TF Family:	ARF
Gene Name(Synonym):	ARFTF5
Uniprot ID:	C0PGA8

Overview of domains present in v5 transcripts
	PF02362	PF06507
Zm00001eb076420_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d002929	DAPseq	sequence	fimo	position
Zm00001d002929	DAPseq	sequence	fimo	position
Zm00001d002929	ChIPseq	sequence	fimo	position
Zm00001d002929	PChIPseq	sequence	fimo	position

Zm00001eb076420_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MGPQPPLHLPAANGDSIVDRDVWLACAVPLSRLPAVGAEVYYFPHGHAEQCPAHLPAPLPAPHLFPCTVAGVSLGADDET
NEVFAKISLSPGPHRGPAAACRTDPTSDCPPQELSYFTKELTQSDANNGGGFSVPRYCADHIFPTLDFDANPPVQKLFMR
DTRGNPWQFRHIYRGTPRRHLLTTGWSRFVNAKLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPRVGSGAGVDPDQPP
PRNARARVPPQDVIEAARLAAEGRSFAVTYFPRQAAGEFIVPRDEVEGVLATRWEPGAQVRMQVMEAEDTRRTVWADGHV
KSLHQNIWRALEIDWDDSSPLSPNLSRFVNAWQVELVTHPPLPNGARICNPIASLCHGDVSYPLIGSEIQGPPIPASMQG
ARHTGPCAAPSESSAVLTNRVLFPLLNPDLQMPPFTSPSDSSEILDPESASPPNKSVRLPPAELPVQVKSIQLFGATIMV
HVVRSVACGGCCEELNGAPSGDATADGSVGKDV

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF02362
PF06507
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Nucleotide Sequence
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GTAAACCACTATATTGTATTAATTA...

GTAAACCACTATATTGTATTAATTAATGAAAATTGAACGAAAAAATACACTAATAAAAGGTAGGCATCGTTCGATCATCTGGATATCCATCTTTAATCTGTTGCACTTCCTTCCTTCTCACCGACGAATCCTCCATCCCGCGCAGCATCTCCTCCCTCCCTCCCTCCGCTCCGTCCGCGTCGCCAAACCCTAGTAGTACGTTGTACAGGACAATGGGGCCACAGCCACCGCTTCACCTTCCCGCCGCCAACGGCGACAGCATCGTCGACCGCGACGTTTGGCTCGCCTGCGCCGTCCCGCTCTCCCGCCTCCCCGCCGTCGGTGCCGAGGTCTACTACTTCCCGCACGGCCACGCCGAGCAGTGCCCCGCGCATCTCCCGGCGCCGCTCCCGGCGCCGCACCTCTTCCCTTGCACCGTCGCCGGCGTCAGCCTTGGCGCGGACGACGAGACCAACGAGGTGTTCGCCAAAATCTCCCTCAGCCCAGGCCCCCACCGCGGGCCCGCCGCCGCTTGTCGTACCGACCCCACCAGCGACTGCCCGCCGCAGGAGCTCAGTTACTTCACCAAGGAGCTCACGCAGAGCGACGCCAACAACGGCGGCGGATTCTCCGTCCCGCGCTACTGCGCCGACCACATCTTCCCCACGCTCGACTTCGACGCCAACCCGCCCGTGCAGAAGCTTTTCATGCGCGACACCAGGGGCAACCCGTGGCAGTTCCGCCACATCTACCGCGGCACGCCACGCCGCCACCTGCTTACCACCGGCTGGAGCAGGTTCGTCAACGCCAAGCTGCTCGTCGCGGGGGACATCGTCGTCTTCATGCGCCGCCACAACGGCGACCTCATCGTCGGCCTGCGCCGCACGCCCAGGTACCCGCTCGTCTTCCCCAGGGTCGGGTCCGGAGCCGGGGTCGACCCGGACCAGCCCCCGCCCCGCAACGCGCGCGCGCGGGTACCGCCCCAGGACGTCATTGAGGCCGCACGCCTCGCCGCGGAGGGCAGGTCCTTCGCGGTCACCTACTTCCCGAGACAGGCCGCCGGGGAGTTCATCGTCCCGCGCGACGAGGTGGAGGGCGTGCTCGCCACCCGCTGGGAGCCAGGCGCGCAGGTGCGTATGCAGGTCATGGAGGCCGAGGACACGCGGCGCACCGTGTGGGCCGACGGCCACGTCAAGTCGCTCCACCAAAACATCTGGCGAGCGCTCGAGATCGACTGGGATGATTCCTCTCCATTATCACCAAATCTGAGCAGATTTGTGAATGCTTGGCAAGTCGAGCTTGTTACACACCCTCCTCTTCCAAATGGAGCGAGGATCTGCAACCCAATTGCGTCTCTTTGCCATGGAGATGTCTCTTATCCACTGATCGGATCGGAAATCCAGGGGCCACCAATTCCTGCTAGCATGCAGGGAGCCAGGCACACCGGCCCTTGTGCTGCGCCCTCTGAATCTTCTGCAGTGCTCACGAATCGGGTACTGTTCCCCCTGCTCAACCCGGACCTCCAGATGCCACCGTTTACAAGCCCCAGTGATTCCTCTGAGATTCTGGATCCTGAATCTGCTTCTCCTCCCAACAAATCAGTAAGGTTGCCTCCAGCAGAGCTTCCAGTCCAAGTGAAGAGCATACAGCTCTTTGGCGCCACAATCATGGTCCATGTTGTGCGAAGTGTTGCCTGTGGTGGTTGTTGTGAAGAACTGAATGGAGCTCCTAGTGGTGATGCTACGGCTGATGGCAGTGTCGGAAAAGATGTCTAAACCATGCACCTGTACTTGAAGATGCCTTTTAAGTCTGGGAGTGTGGGTTTCTACTACCAAAGTACAAGTGTTGGTGCATGCAGAGTTTATCTGTAGCTACATTTAGTAGGCTGTGGGGGGAGTATTACCGTTGCAAGTTGCAACCCATGGCTGTAGTTTAGTTAACAGAACACTTCATATTGTTGGTTGGTTGATTCAATTCTGGGAGTTTGGTCGTATCACTTTCTTCTGCTCTGCTGTTGCAATTGCATTGCGCGCAACTATATGTGGGTTTAATTTGGTAATGATATGGGTCAATGACCCTTCCCCCGCTAATTAATTGTTTGTTGGGTGTGGATCAGCTCATGTGGAACCATGCCTACCTTGCCTGCTCACTTGTGAAAGACGAATGTTGCCCCAGTGCATATGCATGCATCTTTCTGGTGGCACCTCTGTCCCAATCTCTGCTAAAAAGGCAGTCCTTTTTTTGTTTTATGTATTTCTATTAGTTTTCCATTCTGTATTTGCATTGCATTACTTTATTTAATTTGCCGGTCTTGCATGCACCATATACATATCTCTTTCTTTCTTTTAACAAGTACTAACGCATAGCAATCCACACCAACAGCTAGCTGCTATTAACTGTACGTATAGTAGCCTATAGTAGGTAAAAGGAGGCACTCACTCATCTCACTTGGTACAAAGCACAAGCAAGCAATTACTACGTCTCCATCCAAAGCAAGGGGGGAAGCTCGCAGATCCATCCATCCATCGGACACCATGCATGCATGCATGGGCTGCCCCGCCCCCGACCGACCAGGCCTCCTTACCGACGACGGCGACCTACCACGCCCGGTCCCCGTGCGCGCGCCTCCGAGTGAGGCTCCGGATCCAGCCTCTCCCTCTGGCCTTGGACCGCTCAGCCGCCGCCGCCGCCGCCTTCTTGCCGTCCAGCCCACCCGCAGCGGCGGACGACCTCCTCCAGCGCGCCAGCTGCAGCATGCGGCCCACCACCTGTTTGCGCCACCGGGTGACGCCGACACGCTTGACGTGCTCCACCGCTACCATGGTCGTCGTCGACGACGACCTCGCGGGAGCTGCCGCCTTGTGCTGGCTCTGGCTGTCCCACGTCGCCTTGCCGTTGTCCTCGAATTTGATGGAGATGAAGGAATCTTTTTTTTTTCACATCCGCCGGGCCACTGAATCATTGATCTGGCAAGCAGACAAGAAACAAGCAAACTGCAGATGGATGGGATTGTACCATCGAGGCTTGCGACGGAGGCGGTGGCGTCGTCGTCGTCGGAGTAGCAGTTGTTGTCCCGCCCTCGTCCCCGGTGGTGGCGGGAGTCGAGGCGCTGGAGGAAGGAGGAGCCGAGCGCGAAGACCTTGGGGAGGGAGATGCTCCTGCTCCTGCTCCTGCTTTTGCGGCGGGCGTCGTCGTCGATCTTATTGTTGTTGGCAGCGGCGAGGAGGAGGAGGAGGCGATCCTTGAGGCAGTGAGCGCAGACGCCGACGCCGACCTCCCGGGGATGGAAACAGCAGTAGCCTGGGACGTCGGCCTGCTGCCCATTTCCGTACCCGTACGCCTGCTGCTGCTTGTTCATGCTTCCAATTCCTTCCCTGCTTCTACTTTTGCAATGGGATGACTGGAGGAAGAAGAAAAGAAGCTTCACTCCTCCTCAATCAGAGTTCGGAGAGCGACGGACGGAGATCTGCGCAAGGAAGGAG

GRMZM5G808366_T01 from maize genome v3

Related TFome: pUT3116

Amino Acid Sequence
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MGPQPPLHLPAANGDSIVDRDVWLACAVPLSRLPAVGAEVYYFPHGHAEQCPAHLPAPLPAPHLFPCTVAGVSLGADDET
NEVFAKISLSPGPHRGPAAACRTDPTSDCPPQELSYFTKELTQSDANNGGGFSVPRYCADHIFPTLDFDANPPVQKLFMR
DTRGNPWQFRHIYRGTPRRHLLTTGWSRFVNAKLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPRVGSGAGVDPDQPP
PRNARARVPPQDVIEAARLAAEGRSFAVTYFPRQAAGEFIVPRDEVEGVLATRWEPGAQVRMQVMEAEDTRRTVWADGHV
KSLHQNIWRALEIDWDDSSPLSPNLSRFVNAWQVELVTHPPLPNGARICNPIASLCHGDVSYPLIGSEIQGPPIPASMQG
ARHTGPCAAPSESSAVLTNRVLFPLLNPDLQMPPFTSPSDSSEILDPESASPPNKSVRLPPAELPVQVKSIQLFGATIMV
HVVRSVACGGCCEELNGAPSGDATADGSVGKDV

Nucleotide Sequence
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CTTCCTTCCTTCTCACCGACGAATC...

CTTCCTTCCTTCTCACCGACGAATCCTCCATCCCGCGCAGCATCTCCTCCCTCCCTCCCTCCGCTCCGTCCGCGTCGCCAAACCCTAGTAGTACGTTGTACAGGACAATGGGGCCACAGCCACCGCTTCACCTTCCCGCCGCCAACGGCGACAGCATCGTCGACCGCGACGTTTGGCTCGCCTGCGCCGTCCCGCTCTCCCGCCTCCCCGCCGTCGGTGCCGAGGTCTACTACTTCCCGCACGGCCACGCCGAGCAGTGCCCCGCGCATCTCCCGGCGCCGCTCCCGGCGCCGCACCTCTTCCCTTGCACCGTCGCCGGCGTCAGCCTTGGCGCGGACGACGAGACCAACGAGGTGTTCGCCAAAATCTCCCTCAGCCCAGGCCCCCACCGCGGGCCCGCCGCCGCTTGTCGTACCGACCCCACCAGCGACTGCCCGCCGCAGGAGCTCAGTTACTTCACCAAGGAGCTCACGCAGAGCGACGCCAACAACGGCGGCGGATTCTCCGTCCCGCGCTACTGCGCCGACCACATCTTCCCCACGCTCGACTTCGACGCCAACCCGCCCGTGCAGAAGCTTTTCATGCGCGACACCAGGGGCAACCCGTGGCAGTTCCGCCACATCTACCGCGGCACGCCACGCCGCCACCTGCTTACCACCGGCTGGAGCAGGTTCGTCAACGCCAAGCTGCTCGTCGCGGGGGACATCGTCGTCTTCATGCGCCGCCACAACGGCGACCTCATCGTCGGCCTGCGCCGCACGCCCAGGTACCCGCTCGTCTTCCCCAGGGTCGGGTCCGGAGCCGGGGTCGACCCGGACCAGCCCCCGCCCCGCAACGCGCGCGCGCGGGTACCGCCCCAGGACGTCATTGAGGCCGCACGCCTCGCCGCGGAGGGCAGGTCCTTCGCGGTCACCTACTTCCCGAGACAGGCCGCCGGGGAGTTCATCGTCCCGCGCGACGAGGTGGAGGGCGTGCTCGCCACCCGCTGGGAGCCAGGCGCGCAGGTGCGTATGCAGGTCATGGAGGCCGAGGACACGCGGCGCACCGTGTGGGCCGACGGCCACGTCAAGTCGCTCCACCAAAACATCTGGCGAGCGCTCGAGATCGACTGGGATGATTCCTCTCCATTATCACCAAATCTGAGCAGATTTGTGAATGCTTGGCAAGTCGAGCTTGTTACACACCCTCCTCTTCCAAATGGAGCGAGGATCTGCAACCCAATTGCGTCTCTTTGCCATGGAGATGTCTCTTATCCACTGATCGGATCGGAAATCCAGGGGCCACCAATTCCTGCTAGCATGCAGGGAGCCAGGCACACCGGCCCTTGTGCTGCGCCCTCTGAATCTTCTGCAGTGCTCACGAATCGGGTACTGTTCCCCCTGCTCAACCCGGACCTCCAGATGCCACCGTTTACAAGCCCCAGTGATTCCTCTGAGATTCTGGATCCTGAATCTGCTTCTCCTCCCAACAAATCAGTAAGGTTGCCTCCAGCAGAGCTTCCAGTCCAAGTGAAGAGCATACAGCTCTTTGGCGCCACAATCATGGTCCATGTTGTGCGAAGTGTTGCCTGTGGTGGTTGTTGTGAAGAACTGAATGGAGCTCCTAGTGGTGATGCTACGGCTGATGGCAGTGTCGGAAAAGATGTCTAAACCATGCACCTGTACTTGAAGATGCCTTTTAAGTCTGGGAGTGTGGGTTTCTACTACCAAAGTACAAGTGTTGGTGCATGCAGAGTTTATCTGTAGCTACATTTAGTAGGCTGTGGGGGGAGTATTACCGTTGCAAGTTGCAACCCATGGCTGTAGTTTAGTTAACAGAACACTTCATATTGTTGGTTGGTTGATTCAATTCTGGGAGTTTGGTCGTATCACTTTCTTCTGCTCTGCTGTTGCAATTGCATTGCGCGCAACTATATGTGGGTTTAATTTGGTAATGATATGGGTCAATGACCCTTCCCCCGCTAATTAATTGTTTGTTGGGTGTGGATCAGCTCATGTGGAA

Zm00001d002929_T001 from maize genome v4

Amino Acid Sequence
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MGPQPPLHLPAANGDSIVDRDVWLACAVPLSRLPAVGAEVYYFPHGHAEQCPAHLPAPLPAPHLFPCTVAGVSLGADDET
NEVFAKISLSPGPHRGPAAACRTDPTSDCPPQELSYFTKELTQSDANNGGGFSVPRYCADHIFPTLDFDANPPVQKLFMR
DTRGNPWQFRHIYRGTPRRHLLTTGWSRFVNAKLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPRVGSGAGVDPDQPP
PRNARARVPPQDVIEAARLAAEGRSFAVTYFPRQAAGEFIVPRDEVEGVLATRWEPGAQVRMQVMEAEDTRRTVWADGHV
KSLHQNIWRALEIDWDDSSPLSPNLSRFVNAWQVELVTHPPLPNGARICNPIASLCHGDVSYPLIGSEIQGPPIPASMQG
ARHTGPCAAPSESSAVLTNRVLFPLLNPDLQMPPFTSPSDSSEILDPESASPPNKSVRLPPAELPVQVKSIQLFGATIMV
HVVRSVACGGCCEELNGAPSGDATADGSVGKDV

Nucleotide Sequence
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CCGACGAATCCTCCATCCCGCGCAG...

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Protein ZmARF5

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmARF5 is the regulator

Interactions where ZmARF5 is the target
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Zm00001eb076420_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM5G808366_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d002929_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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